The lender has pulled its two-year fixed rates of 5.82%, 6.02% and 6.52% along with its three-year fixed deals of 5.95%, 6.15% and 6.65%.
The building society’s fees for its five-year fixed rate mortgages jumped up to £699. The rates on this product are now 6.15% for a max LTV of 75%, 6.35% for 90% max LTV and 6.75% for max LTV of 95%.
The lender has also put a £1m cap on its mortgage lending.
The changes to fixed rate deals will apply to both new mortgages and re-mortgage customers.
The smallest rate rise will be on two-year fixed rate mortgages with an increase of 0.12%, with no change to the £499 fee.
Nationwide has also withdrawn its Open Market Home Buy Scheme because the scheme finished at the end of March.
Royal Bank of Scotland, Alliance & Leicester and Britannia also all raised rates.